scanpy_plus documentation
=========================

``scanpy_plus`` extends Scanpy with practical utilities for preprocessing, analysis,
visualization, and AnnData I/O workflows.

.. toctree::
   :maxdepth: 2
   :caption: User Guide

   overview
   installation
   usage
   tutorials/index
   api/index
   contributing


Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`